Advanced cbq shell: test_timeout passes on centos but fails on windows 64 bit machine

Test which fails:
./testrunner -i local-win.ini -t tuqquery.tuq_advancedcbqshell.AdvancedQueryTests.test_timeout -p doc-per-day=1 -p skip_cleanup=True

What the test does?
This test writes the following to a file and executes the file from go_cbq using -f options and -s=\source option.

\set -timeout "10ms";
create primary index on default;
select * from default;

Whats wrong here?
create primary index on default succeeds though it takes more than 10ms to execute

Same results are seen if these commands are executed separately on the shell.